W***o 发帖数: 6519 | 1 I'm running GATK downloaded from Broad Institute, when I run their .jar file
, I got below error. i guess this may be because of the awt headless setting
is wrong? I ran the .jar file on a remote Mac server through SSH, I guess
the program cannot initiate a window (awt swing?), it complains like below.
How can I fix this? - thanks a lot
##### ERROR ----------------------------------------------------------------
--------------------------
##### ERROR A GATK RUNTIME ERROR has occurred (version 2.5-2-gf57256b):
##### ERROR
##### ERROR Please check the documentation guide to see if this is a known
problem
##### ERROR If not, please post the error, with stack trace, to the GATK
forum
##### ERROR Visit our website and forum for extensive documentation and
answers to
##### ERROR commonly asked questions http://www.broadinstitute.org/gatk
##### ERROR
##### ERROR MESSAGE: Can't connect to window server - not enough permissions.
##### ERROR ----------------------------------------------------------------
-------------------------- |
|